Genetic diversity and population structure of the mangrove crab (Ucides occidentalis) in Tumbes, Peru

Authors

  • Z. A. Ordinola Universidad Nacional de Tumbes. Facultad de Ingeniería Pesquera y Ciencias del Mar (Puerto Pizzaro, Tumbes)
  • E. G. Vieyra Universidad Nacional de Tumbes. Facultad de Ingeniería Pesquera y Ciencias del Mar (Puerto Pizzaro, Tumbes)
  • B. E. Ramírez Universidad Nacional de Tumbes. Escuela de Posgrado (Tumbes)
  • K. Y. Saavedra Universidad Nacional de Tumbes. Escuela de Posgrado (Tumbes)

DOI:

https://doi.org/10.30972/vet.3114615

Keywords:

Crab, genetic variability, mangrove, COI gene, biodiversity

Abstract

Mangrove is one of the most threatened coastal ecosystems on earth. Its ecological functioning depends in part of activity of key species Ucides occidentalis. The crab stocks have been overfished in mangroves of Peru. The strong decline of the crab population (up 35.8% in 11 years) may make it necessary to cultivate larvae of this crab to repopulate the mangroves. However, an adequate repopulation requires to know its genetic diversity and genetic population structure. Therefore, the present study aimed to determine these aspects of U. occidentalis in the mangroves of Tumbes, Peru. A total of 56 individuals of U. occidentalis were collected, of which we obtained 42 nucleotide sequences of the gene fragment COI. The results indicated a high level of genetic diversity (as assessed by the haplotypes number: 30, the most frequency of more frequent haplotype: 14.29% and haplotype diversity: 0.9721; nucleotide differences average: 4.396 and nucleotide diversity: 0.00810), and a low population genetic structure evaluated by AMOVA (genetic variability between populations: 4%).

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References

Alemán S et al. 2017. Ampliación de la distribución sur de Ucides occidentalis (Decapoda: Ucididae) y Cardisoma crassum (Decapoda: Gecarcinidae). Rev Peruana Biol 24: 107-110.

Almerão MP et al. 2018. Genetic diversity of the invasive crayfish Procambarus clarkii in France. Limnologica 69: 135-141.

Arif IA, Khan HA. 2009. Molecular markers for biodiversity analysis of wildlife animals: a brief review. Anim Biodivers Conserv 32: 9-17.

Britto FB et al. 2011. Research note single primer-based DNA amplification as a suitable and low-cost tool for assessing genetic diversity in mangrove crabs. Genet & Molec Res 10: 4084-4092.

Britto FB et al. 2018. Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast. https://peerj.com/articles /4702/

De Britto SD, Abrunhosa FA, Diele K. 2017. Metamorphosis of the edible mangrove crab Ucides cordatus (Ucididae) in response to benthic microbial biofilms. J Exp Marine Biol & Ecol 492: 132-140.

Charcape RM, Moutarde F. 2005. Diversidad florística y conservación del Santuario Regional de Piura Manglares San Pedro de Vice-Sechura. Rev Peruana Biol 12: 327-334.

Cottens KF. 2009. Efeitos da temperatura, intensidade luminosa e da densidade de cultivo na larvicultura de Ucides cordatus (Linnaeus, 1763) (Crustacea, Decapoda. Brachyura) em laboratorio. Dissertação de Mestrado, Universidade Federal do Paraná, Curitiba, Brasil, 82 p.

Cottens KF et al. 2014. Cultivo de larvas de Ucides cordatus (Linneau, 1763) sob diferentes intensidades luminosas. Arq Bras Med Vet Zoot 66: 1464-1470.

Ewald M. 2006. Isolation and characterization of nuclear and mitochondrial genetic markers for population studies of Ucides cordatus cordatus (Decapoda: Brachyura). Doctor dissertation, University of Bremen, Bremen, 101 p.

Ferrer MS et al. 2018. Genetic diversity of Philippine Gracilaria salicornia (Gracilariaceae, Rhodophyta) based on mitochondrial COI-5P sequences. Biologia 12: 1-9.

González EA. 2011.Análisis de la diversidad genética en poblaciones naturales de especies vegetales amenazadas: Ilex perado sp lopezlilloi (Aquifoliaceae), Silene nocteolens (Caryophyllaceae) y Sorbus aria (Rosaceae). Tesis Doctoral, Uni-versidad de las Palmas de Gran Canaria, Las Palmas de Gran Canaria, 238 p.

INRENA. 2007. Plan Maestro del Santuario Nacional Los Manglares de Tumbes 2007-2011, 1ra edición, Inrena, Lima, Perú, 197 p.

Ma H, Ma C, Ma L. 2011. Population genetic diversity of mud crab (Scylla pa-ramamosain) in Hainan Island of China based on mitochondrial DNA. Biochem Systemat & Ecol 39: 434–440.

Mendoza O et al. 2017. Respuesta fisiológica y molecular de Anadara tuberculosa (Arcoida: Arcidae) al estrés de salinidad. Rev Biol Trop 65: 1142-1151.

Oliveira JF. 2009. Filogeografia e demografia evolutiva de Ucides cordatus (Linnaeus 1763) e Cardisoma guanhumi (Latreille, 1825) na costa do Brasil. Tese de Doutor, Universidade Federal do Paraná, Curitiba, Brasil. 118 p.

Orélis RR, Chammas MA, Ostrensky A, Boeger WA. 2012. Viability of the etiologic agent of the Lethargic Crab Disease, Exophiala cancerae, during cooking of the mangrove-land crab. Food Control 25: 591-593.

Page KS, Scribner KT. 2004. Genetic diversity of wild and hatchery lake trout populations: relevance for management and restoration in the Great Lakes. Trans Am Fish Soc 133: 674-691.

Sarker SK et al. 2016. Are we failing to protect threatened mangroves in the Sundarbans world heritage ecosystem? Scientific Reports 6: 21234.

Solano F. 2006. Aspectos pesqueros biológicos y socioeconómicos de la captura de cangrejo rojo (Ucides occidentalis) en los manglares del Ecuador, 1ra edición, Instituto Nacional de Pesca, Guayaquil, 32 p.

Trontelj P, Machino Y, Sket B. 2005. Phylogenetic and phylogeographic relation-ships in the crayfish genus Austropotamobius inferred from mitochondrial COI gene sequences. Molec Phylogen & Evolut 34: 212-226.

Vergamini FG, Pileggi LG, Mantelatto FL. 2011. Genetic variability of the Amazon River prawn Macrobrachium amazonicum (Decapoda, Caridea, Palae-monidae). Contrib Zool. 80: 67-83.

Zhang C, Li Q, Wu X, Liu Q, Cheng Y. 2018. Genetic diversity and genetic structure of farmed and wild Chinese mitten crab (Eriocheir sinensis) populations from three major basins by mitochondrial DNA COI and Cyt b gene sequences. Mi-tochondrial DNA Part A 29: 1081-1089.

Published

2020-12-18

How to Cite

Ordinola, Z. A., Vieyra, E. G., Ramírez, B. E., & Saavedra, K. Y. (2020). Genetic diversity and population structure of the mangrove crab (Ucides occidentalis) in Tumbes, Peru. Revista Veterinaria, 31(1), 33–37. https://doi.org/10.30972/vet.3114615

Issue

Section

Trabajos de Investigación